BINTIME plot

Usage

bintime_plot(
  obj,
  analyte,
  method = "kmeans",
  time = "TAFD",
  color = NULL,
  facet = "DOSE",
  min_time = NULL,
  max_time = NULL,
  points = FALSE,
  cfb = FALSE,
  caption = TRUE,
  title = NULL,
  size = 1.5,
  alpha = 1,
  scales = "fixed",
  refline = NULL,
  legend = TRUE
)

Arguments

obj

A nif object.

analyte

The analyte as character.

method

Univariate class intervals method, can be one of jenks, kmeans, pretty, quantile, hclust, sd, bclust or fisher. See classInt::classInterval() for details.

time

The time field.

color

The coloring field.

facet

The faceting field, defaults to DOSE.

min_time

The minimal time, as numeric.

max_time

The maximal time, as numeric.

points

Plot original data points as logical.

cfb

Plot change from baseline, as logical.

caption

Show caption as logical.

title

The plot title, as character. If none is provided, a generic title based on the analyte will be chosen. Override this by setting title = "", if needed.

size

The point size.

alpha

The alpha parameter for the data points.

scales

The scales parameter to facet_wrap.

refline

Plot horizontal dashed reference lines at these y axis values, defaults to NULL (no lines).

legend

Show legend.

Value

A ggplot2 object.

Examples

examplinib_poc_nif |>
  dplyr::filter(TAFD < 48) |>
  bintime_plot("RS2023", points = TRUE, alpha = 0.2)